BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002B10SP1|AL424918
(960 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1503 1868 0.0
>3x_Contig1503
Length = 10719
Score = 1868 bits (941), Expect = 0.0
Identities = 956/959 (99%), Gaps = 2/959 (0%)
Strand = Plus / Minus
Query: 2 tatactaactatcattcctaatttgaaaccgataatctcagtcaatattaaacatgcagg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6661 tatactaactatcattcctaatttgaaaccgataatctcagtcaatattaaacatgcagg 6602
Query: 62 aaaagtttacccaatcacaataaatgccgatgctaaggcagcagacctaagagctaaagt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6601 aaaagtttacccaatcacaataaatgccgatgctaaggcagcagacctaagagctaaagt 6542
Query: 122 tgaagctctgactcttgttccacaagaaagacaaaaatacatggttaagggaggtttaac 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6541 tgaagctctgactcttgttccacaagaaagacaaaaatacatggttaagggaggtttaac 6482
Query: 182 ggataacgaaacgttagtttcatctgtcatcaaagctaaggctacagtaatggttcttgg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6481 ggataacgaaacgttagtttcatctgtcatcaaagctaaggctacagtaatggttcttgg 6422
Query: 242 aacccctgatgctaatttagtctttaaaccaacggatgatacgaaatttttggaggattt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6421 aacccctgatgctaatttagtctttaaaccaacggatgatacgaaatttttggaggattt 6362
Query: 302 aactgacaaggaaagattgatgcaagaggataccattccaatggggttaagaaatatggg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6361 aactgacaaggaaagattgatgcaagaggataccattccaatggggttaagaaatatggg 6302
Query: 362 taatacatgttatttcaatgcatctttgcaagctctatacaggattaaacctttgagaga 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6301 taatacatgttatttcaatgcatctttgcaagctctatacaggattaaacctttgagaga 6242
Query: 422 gaaggtattggcctataacgagccaaatcctgatctacacggacagttagtcatacagct 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6241 gaaggtattggcctataacgagccaaatcctgatctacacggacagttagtcatacagct 6182
Query: 482 gagaaattgtttcaatgcatttgctcaaaggaaagagaaggagttcaccccaattattct 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6181 gagaaattgtttcaatgcatttgctcaaaggaaagagaaggagttcaccccaattattct 6122
Query: 542 actcacagtcttgagaaagatttacccgcaattcgctgagaaggacccaagcactgggtt 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6121 actcacagtcttgagaaagatttacccgcaattcgctgagaaggacccaagcactgggtt 6062
Query: 602 ttacaagcaacaggatgcggaagagttgttcacacagttgcttcacactattgacactgt 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6061 ttacaagcaacaggatgcggaagagttgttcacacagttgcttcacactattgacactgt 6002
Query: 662 gtttggtgaatccttgtcatctaagttcgagatcgaattccaaactacagttaaggatac 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6001 gtttggtgaatccttgtcatctaagttcgagatcgaattccaaactacagttaaggatac 5942
Query: 722 tctgaacgaaacagacgtacaaaccaagatagaatcagataaaaaattgcaatgccatat 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5941 tctgaacgaaacagacgtacaaaccaagatagaatcagataaaaaattgcaatgccatat 5882
Query: 782 ttcaggtactaccaatttcctaaaaaatggtcttactgaatccttagtcgagaaagtgga 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5881 ttcaggtactaccaatttcctaaaaaatggtcttactgaatccttagtcgagaaagtgga 5822
Query: 842 gaaaagatctgaagctactggttctaactcgatctttgagaattctaagaagattaccaa 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5821 gaaaagatctgaagctactggttctaactcgatctttgagaattctaagaagattaccaa 5762
Query: 902 attaccggaatatttgamagttcagtttgttaga-tttattgg-aaagatcgactggta 958
||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||
Sbjct: 5761 attaccggaatatttgacagttcagtttgttagattttattggaaaagatcgactggta 5703
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6983
Number of Sequences: 1807
Number of extensions: 6983
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 960
length of database: 10,358,551
effective HSP length: 16
effective length of query: 944
effective length of database: 10,329,639
effective search space: 9751179216
effective search space used: 9751179216
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)